Programs
DomainWorld is a collection of programs that can be used independently or together in a larger pipeline. Each program comes with an extensive manual that describes how to use it. In any case please contact us for any questions or comments.
Depending on what you want to do different programs can help you:
| Name | Purpose |
|---|---|
| DOGMA | Check the quality of a proteome or transcriptome |
| DomRates-Seq | Analyses the changes of domain arrangements along a phylogenetic tree with Sequence-Similarity and multistep support |
| DomRates | Analyses the changes of domain arrangements along a phylogenetic tree |
| DW-Helper | A couple of small programs to help you preparing your data |
| RADIANT | Fast annotation of sequences with Pfam domains |
| RADS | Search in a database for similar domain arrangements |
DomainWorld is a set of programs that can help to analyse domain arrangements and their changes. It can use domain annotations from different sources, external as internal programs.