MDA
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Groups
align Directory Reference

Files

file  consistency_aln.cpp
 
file  consistency_aln.hpp [code]
 Alignment functions to be used in the consistency approach.
 
file  domain_aln.cpp
 
file  domain_aln.hpp [code]
 Several functions related to domain alignment.
 
file  fw_bw.hpp [code]
 The forward and backward algorithms.
 
file  HMM.cpp
 
file  HMM.hpp [code]
 Contains a HMM model.
 
file  Library.hpp [code]
 Contains the Library class to handle pairwise matches.
 
file  seq_align.hpp [code]