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MDAT::SequenceSetBase< SequenceType, MemSafe > Member List

This is the complete list of members for MDAT::SequenceSetBase< SequenceType, MemSafe >, including all inherited members.

build_index() const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
index_changed() const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
n_seqs() const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
next() (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
operator[](unsigned int index)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
operator[](std::string &seq_id) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
operator[](unsigned int index) const MDAT::SequenceSetBase< SequenceType, MemSafe >inline
operator[](const std::string &seq_id) const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
read(const std::string &seq_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
read_index(const std::string &index_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
seq(unsigned int index) const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
SequenceSetBase() (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
SequenceSetBase(const std::string &seq_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
SequenceSetBase(const std::string &seq_f, const std::string &index_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
set_file(const std::string &seq_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
set_file(const std::string &seq_f, const std::string &index_f) (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
write_index(const std::string &index_f) const (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inline
~SequenceSetBase() (defined in MDAT::SequenceSetBase< SequenceType, MemSafe >)MDAT::SequenceSetBase< SequenceType, MemSafe >inlinevirtual